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"""Job title Research Assistant – Translational Ubiquitomics – Cancer Immunology group Division Medical Sciences Department Nuffield Department of Medicine Location CAMS Oxford Institute, Henry Wellcome Building for Molecular Physiology, Roosevelt Drive, Old Road Campus, Oxford, OX3 7BN Grade and salary Grade 6: £32,332 - £38,205 with a discretionary range to £41,732 per annum Hours Full time Contract type Fixed-term contract for 18 months Reporting to Adan Pinto Fernandez and Benedikt Kessler, Career Development Fellow and Professor Vacancy reference 167676 Additional information Funding provided by CAMS Core grant The role To reinforce the Translational Ubiquitomics-Cancer Immunology research team within the CAMS Oxford Institute (COI) institute Nuffield Department of Medicine (NDM), we seek a highly motivated individual for the role of a Research Assistant. Our research group is focused on studying the UbiquitinProteasome System, a critical regulator of the fate of most cellular proteins. We are interested in discovering aberrant function of the UPS in the context of cancer immunology, and how this can be exploited for the development of novel therapeutics. The main responsibility of this post is to support the laboratory in the characterization of cancer immunomodulatory target genes by different proteomic, biochemical, and immunological techniques. In addition, you will support industry-related activities, including small molecule inhibitor characterisation by studying their activity and selectivity profile, in vitro and in living cells, using activity-based probes and a number of proteomic approaches. In addition, the effects (viability, migration, metabolism, immunogenicity…) of these genes and drugs in cancer cell models will be evaluated in combination with genetic impairment of the selected target gene using knockdown/CRISPR knockout experiments. Responsibilities You will: • • • • • • • • • Perform experiments examining deubiquitylase (DUB) activity profiles using molecular active site probes and small molecule inhibitors. Perform research work with human and mammalian cell lines (tissue culture), inlcuding the generation and maintenance of knockout and knockdown cell llines using CRISPR/siRNA. Prepare mass spectrometry (MS) samples from a variety of biological sources (i.e. patient tissue biopsies, cell cultures, blood, peripheral blood mononuclear cells (PBMCs), etc). Perform functional validation assays including FACS, ELISA, and Incucyte.. Assist with complex proteomics and mass spectrometry data analysis. Be responsible with others for the biological safety of the laboratory. Perform laboratory tests in order to produce reliable and precise data to support scientific investigations. Keep detailed record of all activities and to consolidate data from various projects within the group, interpret the results and to present them to other team members, including external collaborators. Contribute to general lab management (ordering and organisation of stocks) Education and Training • • Attend appropriate scientific seminars, training opportunities and meetings within the research team, in the Centre and University. Participate in the education and training of other staff as necessary and appropriate. General Responsibilities • • • • • Act at all times in the interests of the Institute to ensure good laboratory practice. Be accountable for personal professional conduct within the project. Undertake such other duties as may be required from time to time that are commensurate with the grade and responsibilities of this post. Ensure that work in the laboratory is conducted safely and, in particular, that work is undertaken using appropriate safety procedures and in the dedicated areas. Accord due regard to the University Equal Opportunities and Data Protection policies. 1 • • • Ensure your work in the laboratory is conducted safely at all times and, in particular, that work is undertaken following the appropriate health and safety policies and procedures for the particular area, without compromise to your own safety or that of others who may be affected. Participate in and support the public engagement and widening access activities of the Department and the University. This is anticipated to be not more than 2 days per year. Undertake mandatory training as required by the University, Division and Department. The specific list of training courses may change from time-to-time, in response to both legal and internal University requirements. Selection criteria Essential • • • • • • • • • Degree in biology, immunology, biochemistry, chemistry, biotechnology or similar. Familiarity with biochemistry techniques (e.g. Immunoblotting, immunoprecipitation, pull-down, in vitro enzymatic activity assays). Familiarity with flow cytometry analysis, ELISA, and immune cell purification and culture. Experience in handling cells, tissue culture and gene knockout/knockdown. Exposure to Chemical Biology, handling of small molecule inhibitors, peptides. Basic knowledge of mass spectrometry techniques including sample preparation. Basic knowledge in protein chemistry, expression, separation/purification methods. A responsible nature with a methodical and careful approach to working in the laboratory independently The ability to communicate results clearly and effectively and to discuss scientific ideas both within the work environment. Desirable • • • • Experience in sample preparation for mass spectrometric analysis (Proteomics and/or Metabolomics). Expertise in 1D (2D) electrophoresis, and FPLC & HPLC. Experience in MS data analysis and statistics (i.e. MaxQuant, Perseus, Prism). Basic knowledge of operating an HPLC and mass spectrometer (LC-MS). 2 Pre-employment screening Standard checks If you are offered the post, the offer will be subject to standard pre-employment checks. You will be asked to provide: proof of your right-to-work in the UK; proof of your identity; and (if we haven’t done so already) we will contact the referees you have nominated. You will also be asked to complete a health declaration so that you can tell us about any health conditions or disabilities for which you may need us to make appropriate adjustments. Please read the candidate notes on the University’s pre-employment screening procedures at: https://www.jobs.ox.ac.uk/pre-employment-checks Hazard-specific / Safety-critical duties This job includes hazards or safety-critical activities. If you are offered the post, you will be asked to complete a health questionnaire which will be assessed by our Occupational Health Service, and the offer of employment will be subject a successful outcome of this assessment. The hazards or safety-critical duties involved are as follows: • • Lone Working Regular manual handling 3 About the University of Oxford Welcome to the University of Oxford. We aim to lead the world in research and education for the benefit of society both in the UK and globally. Oxford’s researchers engage with academic, commercial and cultural partners across the world to stimulate high-quality research and enable innovation through a broad range of social, policy and economic impacts. We believe our strengths lie both in empowering individuals and teams to address fundamental questions of global significance, while providing all our staff with a welcoming and inclusive workplace that enables everyone to develop and do their best work. Recognising that diversity is our strength, vital for innovation and creativity, we aspire to build a truly diverse community which values and respects every individual’s unique contribution. While we have long traditions of scholarship, we are also forward-looking, creative and cutting-edge. Oxford is one of Europe's most entrepreneurial universities and we rank first in the UK for university spin-outs, and in recent years we have spun out 15-20 new companies every year. We are also recognised as leaders in support for social enterprise. Join us and you will find a unique, democratic and international community, a great range of staff benefits and access to a vibrant array of cultural activities in the beautiful city of Oxford. For more information, please visit www.ox.ac.uk/about/organisation. About the Nuffield Department of Medicine (NDM) The Nuffield Department of Medicine aims to improve healthcare internationally through its research and teaching. Over the last fifty years, it has pioneered the use of genetics, structural and cellular biology to understand susceptibility to human disease; at the same time, it remains a department of clinical medicine with a clinical interface at the core of its success. The NDM is the largest department in the University of Oxford and the largest department of medicine in Europe by research income. The department is organised around a series of strong and identifiably unique institutes, centres and units; but its aim is to be as non-hierarchical and closely-knit as possible, to encourage the very best interactions and the exchange of ideas between its staff. It supports teaching to encourage the very best students to join academic research. It maintains a £800m portfolio of externally funded research from over 140 different sponsors/funders, and has an annual turnover approaching £200m. The department’s activity is run directly through the University, but also through a series of subsidiary companies and other legal vehicles, tailored to the activity and the countries within which it operates. Across these vehicles and partnerships, the department has over 3,000 staff and students working solely on, or supporting, its research and teaching; and 1,000 of these staff are based in Oxford. The NDM holds collaborative grants with ~40 other departments or centres in the University of Oxford. The NDM is recognised for its diverse impacts in the field of healthcare. These range from the discovery of the mechanism of hypoxic gene regulation (Sir Peter Ratcliffe, Nobel Prize 2019) to the worldwide introduction of artemisinin and combination therapy for malaria (Sir Nick White and others). The underlying strength of the department, and its ability to bring together disciplines, has been evident through its contributions to the pandemic response, including: ISARIC and its overseas activity, IDDO and TGHN, the work of the Africa-Asia Programmes, the Oxford-AZ vaccine, elucidating the structural biology of variants and neutralising antibodies, the Office of National Statistics study, the UK Serology Surveillance platform, the standard testing of commercial assays for the Government, Mobile Apps, RECOVERY trial leading to the worldwide use of dexamethasone, the NHS cohort studies, the COMBAT study. This activity has certainly saved more than 2m lives during the pandemic. 4 The major strategic plans of the NDM are built around, (1) establishing a step-change in to clinical pathology and the study of human disease in all clinical specialities; (2) accelerating the discovery of new medicines; and (3) addressing the burden of worldwide infectious disease, including emerging threats. The GSK-Oxford Molecular and Computational Medicine Institute (MCMI) is aligned with this vision and will be primarily based in its Wellcome Centre for Human Genetics and Big Data Institute with strong links to other departments and its overseas activity. The NDM has a strong commitment to careers and equality of opportunity and treatment. The Department holds an Athena SWAN Silver award in recognition of the commitment made to promote gender equality through our organisational and cultural practices and our efforts to improve the working environment for both men and women. For more information, please see the NDM pages of Equality, Diversity and Inclusion. For more information on NDM please visit: https://www.ndm.ox.ac.uk Chinese Academy of Medical Sciences Oxford Institute (COI) The COI builds upon the CAMS Oxford International Centre of Translational Immunology, established in 2013. Based on the Old Road Campus, Nuffield Department of Medicine, University of Oxford, the COI is a collaboration between the Chinese Academy of Medical Sciences and the University of Oxford. Combining the strengths of both partners, the Institute aims to deliver outstanding science and help to develop innovative medicines to tackle infectious diseases and cancer. COI research focuses on developing novel immunotherapies and vaccine strategies against cancer and infectious disease. These advances are driven by fundamental discoveries in cellular, molecular and structural biology in health and disease. The Institute also provides researchers from across the Medical Science Division at Oxford with centralised resources, encouraging collaborations across the Division and various Institutes. Advanced training is an essential part of the new Institute, which will attract and train the next generation of clinical scientists in the UK and China and international scientists from various other countries. Support is provided, for example, through COI clinical and non-clinical fellowships, an MD/PhD programme funded by the China Scholarship Council, and new programmes aimed at postdoctoral level researchers. Ultimately, the Institute aims to lead with scientific breakthroughs, support and train future generations and contribute to medical advances with a global impact. For more information, please visit: https://www.camsoxford.ox.ac.uk/ 5 How to apply Applications are made through our e-recruitment system and you will find all the information you need about how to apply on our Jobs website https://www.jobs.ox.ac.uk/how-to-apply. If you would like to apply, click on the Apply Now button on the ‘Job Details’ page and follow the onscreen instructions to register as a new user or log-in if you have applied previously. As part of your application you will be asked to provide details of two referees and indicate whether we can contact them now. You will be asked to upload a CV and a supporting statement. The supporting statement must explain how you meet each of the selection criteria for the post using examples of your skills and experience. This may include experience gained in employment, education, or during career breaks (such as time out to care for dependants). Your application will be judged solely on the basis of how you demonstrate that you meet the selection criteria stated in the job description. Please upload all documents as PDF files with your name and the document type in the filename. Please note using a long file name may prevent you from uploading your documents. • http://www.ox.ac.uk/about_the_university/jobs/research/ All applications must be received by midday UK time on the closing date stated in the online advertisement Information for priority candidates A priority candidate is a University employee who is seeking redeployment because they have been advised that they are at risk of redundancy, or on grounds of ill-health/disability. Priority candidates are issued with a redeployment letter by their employing department(s). If you are a priority candidate, please ensure that you attach your redeployment letter to your application (or email it to the contact address on the advert if the application form used for the vacancy does not allow attachments). If you need help Application FAQs, including technical troubleshooting advice is available at: https://staff.web.ox.ac.uk/recruitment-support-faqs. Non-technical questions about this job should be addressed to the recruiting department directly recruitment@ndm.ox.ac.uk To return to the online application at any stage, please go to: www.recruit.ox.ac.uk. Please note that you will receive an automated email from our online recruitment portal to confirm receipt of your application. Please check your spam/junk mail if you do not receive this email. 6 Important information for candidates Data Privacy Please note that any personal data submitted to the University as part of the job application process will be processed in accordance with the GDPR and related UK data protection legislation. For further information, please see the University’s Privacy Notice for Job Applicants at: https://compliance.admin.ox.ac.uk/job-applicant-privacy-policy. The University’s Policy on Data Protection is available at: https://compliance.admin.ox.ac.uk/data-protection-policy. The University’s policy on retirement The University operates an Employer Justified Retirement Age (EJRA) for very senior research posts at grade RSIV/D35 and clinical equivalents E62 and E82, which with effect from 1 October 2023 will be 30 September before the 70th birthday. The justification for this is explained at: https://hr.admin.ox.ac.uk/the-ejra. For existing employees on these grades, any employment beyond the retirement age is subject to approval through the procedures: https://hr.admin.ox.ac.uk/the-ejra. There is no normal or fixed age at which staff in posts at other grades have to retire. Staff at these grades may elect to retire in accordance with the rules of the applicable pension scheme, as may be amended from time to time. Equality of opportunity Entry into employment with the University and progression within employment will be determined only by personal merit and the application of criteria which are related to the duties of each particular post and the relevant salary structure. In all cases, ability to perform the job will be the primary consideration. No applicant or member of staff shall be discriminated against because of age, disability, gender reassignment, marriage or civil partnership, pregnancy or maternity, race, religion or belief, sex, or sexual orientation. 7 Benefits of working at the University Employee benefits University employees enjoy 38 days’ paid holiday, generous pension schemes, travel discounts, and a variety of professional development opportunities. Our range of other employee benefits and discounts also includes free entry to the Botanic Gardens and University colleges, and discounts at University museums. See https://hr.admin.ox.ac.uk/staff-benefits University Club and sports facilities Membership of the University Club is free for all University staff. The University Club offers social, sporting, and hospitality facilities. Staff can also use the University Sports Centre on Iffley Road at discounted rates, including a fitness centre, powerlifting room, and swimming pool. See www.club.ox.ac.uk and https://www.sport.ox.ac.uk/. Information for staff new to Oxford If you are relocating to Oxfordshire from overseas or elsewhere in the UK, the University's Welcome Service website includes practical information about settling in the area, including advice on relocation, accommodation, and local schools. See https://welcome.ox.ac.uk/ There is also a visa loan scheme to cover the costs of UK visa applications for staff and their dependents. See https://staffimmigration.admin.ox.ac.uk/visa-loan-scheme Family-friendly benefits With one of the most generous family leave schemes in the Higher Education sector, and a range of flexible working options, Oxford aims to be a family-friendly employer. We also subscribe to the Work+Family Space, a service that provides practical advice and support for employees who have caring responsibilities. The service offers a free telephone advice line, and the ability to book emergency back-up care for children, adult dependents and elderly relatives. See https://hr.admin.ox.ac.uk/myfamily-care Childcare The University has excellent childcare services, including five University nurseries as well as Universitysupported places at many other private nurseries. For full details, including how to apply and the costs, see https://childcare.admin.ox.ac.uk/ Disabled staff We are committed to supporting members of staff with disabilities or long-term health conditions. For further details, including information about how to make contact, in confidence, with the University’s Staff Disability Advisor, see https://edu.admin.ox.ac.uk/disability-support 8 Staff networks The University has a number of staff networks including the Oxford Research Staff Society, BME staff network, LGBT+ staff network and a disabled staff network. You can find more information at https://edu.admin.ox.ac.uk/networks The University of Oxford Newcomers' Club The University of Oxford Newcomers' Club is an organisation run by volunteers that aims to assist the partners of new staff settle into Oxford, and provides them with an opportunity to meet people and make connections in the local area. See www.newcomers.ox.ac.uk. 9 """^^ . . "application/pdf" . "Past vacancies at the University of Oxford" . . "167676 - Research Assistant - Mass Spectrometry - JD" . "text/turtle" . "RDF/XML description of 167676 - Research Assistant - Mass Spectrometry - JD" . "Title"@en . . "application/xhtml+xml" . . . . "value" . "in dataset" . . . "Source"@en . . . "text/html" . . "application/rdf+xml" .