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172445 KTRR Bioinformatics PDRA JD FINAL.pdf
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value: _________________________________________________________________________ Summary Job title Postdoctoral Research Associate in Bioinformatics Division Medical Sciences Division Department Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences Location Kennedy Institute of Rheumatology, Roosevelt Drive, Headington, Oxford OX3 7FY Grade and salary Grade 8: £45,585 - £51,283 per annum Hours Full time Contract type Fixed-term until 31/07/2026 Reporting to Associate Professor Stephen Sansom Vacancy reference 172445 Additional information A lower grade offer (Grade 7: £36,024 - £ 48,350 p.a.) may be made to a less experienced candidate (such as recent PhD/DPhil graduates) if a suitable candidate cannot be found to fill the Grade 8 position. Research topic Bioinformatic analysis of single-cell and spatial genomics data Principal Investigator / supervisor Associate Professor Stephen Sansom Project team Computational and Single Cell Genomics Project web site https://www.kennedy.ox.ac.uk/research/computational-genomics Funding partner The funds supporting this research project are provided by the Kennedy Trust for Rheumatology Research. Recent publications (1) Spatial transcriptomic characterization of COVID-19 pneumonitis identifies immune circuits related to tissue injury. Cross et al., JCI Insight 2023. (2) Secondary influenza challenge triggers resident memory B cell migration and rapid relocation to boost antibody secretion at infected sites. Maclean et al. Immunity. 2022. (3) A blood atlas of COVID-19 defines hallmarks of disease severity and specificity. COMBAT Consortium. Cell 2022. (4) IL-1-driven stromal–neutrophil interactions define a subset of patients with inflammatory bowel disease that does not respond to therapies. Friedrich et al., Nature Medicine 2021 (5) Distinct fibroblast subsets drive inflammation and damage in arthritis. Croft, A. et al. Nature. 2019. (6) Deconvolution of monocyte responses in inflammatory bowel disease reveals …
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Postdoctoral Research Associate in Bioinformatics
further particulars: 172445 KTRR Bioinformatics PDRA JD FINAL.pdf
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organization part: Kennedy Institute of Rheumatology
formal organization: University of Oxford
spatial: NDORMS, Kennedy Institute of Rheumatology, Roosevelt Drive, Headington, Oxford OX3 7FY
application opening date: 2024-04-18T09:00:00+01:00
salary: Standard Grade 8: £45,585 - £54,395
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comment: The Kennedy Institute at the University of Oxford has an exciting opening for an experienced bioinformatician to join the group of Associate Professor Stephen Sansom (https://sansomlab.org). In this core-funded role you will lead the development of pipelines and tools for the analysis of data from cutting- edge single cell and spatial genomics platforms such as the 10x Chromium and Nanostring CosMx. You will have the opportunity to work with students and postdocs from the Kennedy’s world-leading research groups both to provide bioinformatics training and to make contributions to publications in high impact journals. Researchers at the KIR are using cutting-edge approaches to investigate the immune system and the cellular causes of diseases such as atheroschlerosis, inflammatory bowel disease and arthritis (https://www.kennedy.ox.ac.uk/research/research-groups). You should have an established track record of code development and contributions to publications or submitted manuscripts in peer-reviewed journals that demonstrates your bioinformatics expertise. A PhD/DPhil (or near completion) in a discipline of direct relevant to bioinformatics and genomic research is essential. In this role, you will undertake code development, provide bioinformatics training and perform scientific research developing and acquiring relevant skills as necessary. You will share code with the bioinformatics community, publishing tools and results in peer-reviewed journals. A good understanding of single-cell/spatial genomics data analysis is essential. The successful applicant will be based at the Kennedy Institute of Rheumatology within the Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences. The closing date for this position is **12 noon on Friday 3 May 2024**. Please read the accompanying job description carefully and ensure that you address each selection criteria in a supporting statement which must be uploaded together with your CV when applying online. Fo…
comment: The Kennedy Institute at the University of Oxford has an exciting opening for an experienced bioinformatician to join the group of Associate Professor Stephen Sansom (https://sansomlab.org). In this core-funded role you will lead the development of pipelines and tools for the analysis of data from cutting-edge single cell and spatial genomics platforms such as the 10x Chromium and Nanostring CosMx. You will have the opportunity to work with students and postdocs from the Kennedy’s world-leading research groups both to provide bioinformatics training and to make contributions to publications in high impact journals. Researchers at the KIR are using cutting-edge approaches to investigate the immune system and the cellular causes of diseases such as atheroschlerosis, inflammatory bowel disease and arthritis (https://www.kennedy.ox.ac.uk/research/research-groups). You should have an established track record of code development and contributions to publications or submitted manuscripts in peer-reviewed journals that demonstrates your bioinformatics expertise. A PhD/DPhil (or near completion) in a discipline of direct relevant to bioinformatics and genomic research is essential. In this role, you will undertake code development, provide bioinformatics training and perform scientific research developing and acquiring relevant skills as necessary. You will share code with the bioinformatics community, publishing tools and results in peer-reviewed journals. A good understanding of single-cell/spatial genomics data analysis is essential. The successful applicant will be based at the Kennedy Institute of Rheumatology within the Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences. The closing date for this position is 12 noon on Friday 3 May 2024. Please read the accompanying job description carefully and ensure that you address each selection criteria in a supporting statement which must be uploaded together with your CV when applying online. For fur…
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