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We are looking to hire an outstanding experimental biophysicist to work on exciting force spectroscopy and fluorescence-based projects in single-molecule biophysics within the excellent and highly interdisciplinary Oxford environment.

 

This post is fixed term for 3 years.

This role offers the opportunity to contribute to groundbreaking research and to develop invaluable skills in instrumentation design, interdisciplinary collaboration, and leadership, all within the vibrant scientific community of the University of Oxford.

About the project

In this project, you will design and employ novel forms of biophysical instrumentation (e.g. advanced optical tweezers and magnetic tweezers) to allow us to better study DNA replication and/or chromatin organization at the single-molecule level in a sufficiently high-throughput manner. You will have the flexibility to develop instrumentation using either our commercial systems or custom-built setups, based on your judgment in collaboration with the team. You will then use this instrumentation together with other group members to acquire data on DNA replication and/or chromatin organization at the single-molecule level, and analyze the resulting datasets using biophysical modelling. Both an interest and aptitude in instrumentation development and quantitative biophysics, as well as a willingness to acquaint oneself with biochemical approaches and interact with external collaborators in molecular biology and biochemistry, are essential. The overall goal is to provide novel and sound biophysical insights into DNA replication and/or chromatin organization at the single-molecule level that will advance these exciting fields.

 

Requirements

For this innovative, interdisciplinary project, we are looking a biophysicist, with:

•         a successfully completed Ph.D. degree in biophysics or microscopy

•         practical experience and scientific maturity in the above areas

•         strong aptitude and interest in biophysical instrumentation

•         professional experience with force spectroscopy methods (e.g. optical tweezers, magnetic tweezers, or atomic force microscopy)

•         strong quantitative skills in data analysis and programming

•         willingness to develop an understanding of the relevant biochemistry (DNA and protein structure and function, mechanochemistry, single-molecule kinetics)

•         an independent, well-organized, and reliable work style together with an ability and interest in working in an interdisciplinary team

•         leadership ability to guide fellow group members on quantitative biophysical experiments

•         excellent interpersonal communication skills and a strong interest in the broader field of biophysics, thereby contributing to our interactive lab culture;

 

We look for friendly and driven colleagues to enrich our team. UK visa costs and NHS surcharge fees will be covered. We would like to welcome our new colleague by the spring of 2025.

 

**

Who are we?

**

The Nynke Dekker Lab (https://nynkedekkerlab.web.ox.ac.uk) is a highly successful single-molecule biophysics research lab based in the  Department of Physics and the Kavli Institute of nanoScience Discovery  at the University of Oxford. The lab focuses its studies on understanding DNA replication and chromatin organization from a quantitative perspective both in vitro and in vivo. The lab employs state-of-the-art biophysical techniques (e.g. advanced single-molecule fluorescence microscopy, optical and magnetic tweezers) together with in-house molecular biology and biochemistry, all housed in a brand-new building with high quality laboratory spaces. Studying the dynamics of DNA replication and chromatin organization at the single-molecule level requires broad and integrated expertise; as such, we employ outstanding international scientists trained in biophysics, biochemistry, and cell biology who work together enthusiastically as a multidisciplinary team. You will be part of this group and will interact actively with current members.

 

Information and application

If you're excited about contributing to innovative biophysical research and collaborating with a talented team, we’d love to hear from you!

 

For more information about these positions, or to apply, please contact Prof. Nynke Dekker, e-mail: nynke.dekker@physics.ox.ac.uk Applications should include a motivated cover letter of application, a detailed CV, and the names and contact information of three references. The closing date for applications is 12 noon on 15 January 2025

 

Information on a fully funded PhD position can be found below
"""^^ . "address"@en . . . . "es suborganización de"@es . . _:N2a7f79252caa499895f8b24f2c6976c4 "United Kingdom" . "department" . . . """Fully funded PhD position in Biophysics Join the Nynke Dekker Lab at the University of Oxford to probe the dynamics of eukaryotic replication! Attention all masters students - are you interested in understanding how the cell works at the molecular scale from a quantitative, mechanistic perspective? And are you trained in physics, biophysics, or quantitative biochemistry? Then consider applying to the Nynke Dekker Lab, a renowned biophysics group in the Department of Physics at the University of Oxford that has a fully funded opening for a PhD student to probe the dynamics of eukaryotic replication using single-molecule biophysics and biochemistry. About the project: Understanding eukaryotic replication is important, because during our lifetimes we copy approximately a lightyear’s worth of DNA, and how the different components of the molecular machinery (the replisome) work together to achieve this successfully is an area of highly active research. In our lab, we take on the exciting challenge of understanding the dynamics of DNA replication of this process by studying the activity of eukaryotic replisome at the single-molecule level on both bare DNA and chromatin. In this PhD project, you will learn a diverse set of techniques (synthesizing DNA constructs, purifying proteins, state-of-the-art single-molecule microscopy and measurements, in-depth quantitative analysis) and work together with others in an interdisciplinary team comprised of biologists, (bio)physicists, biochemists, and data scientists. You will be taught how to perform high-quality experiments and then you will be invited to develop new ones of your own, making use of your training and insights! This research, carried out together with collaborators at the University of Oxford, the Francis Crick Institute, the Hubrecht Institute, and elsewhere, should lead to new discoveries and insights that inform our quantitative understanding of DNA replication and advance this exciting field while contributing to the next generation of in vitro single-molecule methods. About the lab: The Nynke Dekker Lab is known for developing single-molecule techniques (McCluskey Optics Express 2021; Liu ACS Photonics 2024) and applying them to the study of DNA and RNA replication (Sánchez Nat Commun 2021; Janissen Mol Cell 2021; Ramírez Montero Nat Commun 2023; Sánchez Nat Commun 2023). The lab moved to Oxford a few months ago in order to take advantage of the outstanding environment that includes the interdisciplinary Kavli Institute for Nanoscience Discovery and a new state-of-the-art building. Lab members are encouraged to develop both their scientific and interpersonal communication skills to help establish a scientifically outstanding and warmly communicative interdisciplinary team that publishes exciting scientific results. As a PhD student in the group, you will have the opportunity to follow coursework, develop your teaching experience, and improve your leadership skills while guiding undergraduate members of the lab. About the application process: Applicants apply to the D. Phil. in Condensed Matter Physics, deadline 8 Jan 2025 (alternatively, one can apply to the D. Phil. in Biochemistry, deadline 3 Dec 2024, please consult in advance). Admission into either program allows the student to start their Ph.D. research in the lab from the beginning of the course. Any enquiries? Email Prof Nynke Dekker at nynke.dekker@physics.ox ac.uk. We hope to hear from you! """^^ . . . . "notation"@en . "text/html" . . . . . . "nd_lab_phd_position_general_audience_ad.pdf" . "site" . . "type" . _:N2a7f79252caa499895f8b24f2c6976c4 . . _:N5c53d2165076418ca7683fe1ed76f84d "United Kingdom" . "OxPoints"@en . _:Na74bac189a1a49378e973f50231b7d26 . _:N5c53d2165076418ca7683fe1ed76f84d "Wellington Square" . "OxPoints"@en . . _:N5c53d2165076418ca7683fe1ed76f84d "OX1 2JD" . . "Clarendon Laboratory" . . . . . . "latitude" . . . "Condensed Matter Physics" . "preferred label"@en . "label" . . . . "sede principale"@it . . "Subject"@en . "valid through (0..1)"@en . "site principal"@fr . "sous-Organization de"@fr . . . . . "Department of Physics, Clarendon Laboratory, Oxford" . _:N144ebced4c0741798a1d30d859ae2c45 "Parks Road" . . . . "email"@en . . 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This role offers the opportunity to contribute to groundbreaking research and to develop invaluable skills in instrumentation design, interdisciplinary collaboration, and leadership, all within the vibrant scientific community of the University of Oxford. **About the project** In this project, you will design and employ novel forms of biophysical instrumentation (e.g. advanced optical tweezers and magnetic tweezers) to allow us to better study DNA replication and/or chromatin organization at the single-molecule level in a sufficiently high-throughput manner. You will have the flexibility to develop instrumentation using either our commercial systems or custom-built setups, based on your judgment in collaboration with the team. You will then use this instrumentation together with other group members to acquire data on DNA replication and/or chromatin organization at the single- molecule level, and analyze the resulting datasets using biophysical modelling. Both an interest and aptitude in instrumentation development and quantitative biophysics, as well as a willingness to acquaint oneself with biochemical approaches and interact with external collaborators in molecular biology and biochemistry, are essential. The overall goal is to provide novel and sound biophysical insights into DNA replication and/or chromatin organization at the single-molecule level that will advance these exciting fields. **Requirements** For this innovative, interdisciplinary project, we are looking a biophysicist, with: • a successfully completed Ph.D. degree in biophysics or microscopy • practical experience and scientific maturity in the above areas • strong aptitude and interest in biophysical instrumentation • professional experience with force spectroscopy methods (e.g. optical tweezers, magnetic tweezers, or atomic force microscopy) • strong quantitative skills in data analysis and programming • willingness to develop an understanding of the relevant biochemistry (DNA and protein structure and function, mechanochemistry, single-molecule kinetics) • an independent, well-organized, and reliable work style together with an ability and interest in working in an interdisciplinary team • leadership ability to guide fellow group members on quantitative biophysical experiments • excellent interpersonal communication skills and a strong interest in the broader field of biophysics, thereby contributing to our interactive lab culture; We look for friendly and driven colleagues to enrich our team. UK visa costs and NHS surcharge fees will be covered. **We would like to welcome our new colleague by the spring of 2025.** ** **Who are we?** ** The Nynke Dekker Lab (https://nynkedekkerlab.web.ox.ac.uk) is a highly successful single-molecule biophysics research lab based in the Department of Physics and the Kavli Institute of nanoScience Discovery at the University of Oxford. The lab focuses its studies on understanding DNA replication and chromatin organization from a quantitative perspective both _in vitro_ and _in vivo_. The lab employs state-of-the-art biophysical techniques (e.g. advanced single-molecule fluorescence microscopy, optical and magnetic tweezers) together with in-house molecular biology and biochemistry, all housed in a brand-new building with high quality laboratory spaces. Studying the dynamics of DNA replication and chromatin organization at the single-molecule level requires broad and integrated expertise; as such, we employ outstanding international scientists trained in biophysics, biochemistry, and cell biology who work together enthusiastically as a multidisciplinary team. You will be part of this group and will interact actively with current members. **Information and application** If you're excited about contributing to innovative biophysical research and collaborating with a talented team, we’d love to hear from you! For more information about these positions, or to apply, please contact Prof. Nynke Dekker, e-mail: **nynke.dekker@physics.ox.ac.uk** Applications should include a motivated cover letter of application, a detailed CV, and the names and contact information of three references. The closing date for applications is 12 noon on 15 January 2025 Information on a fully funded PhD position can be found below """ . . . . . . . . . . . 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